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ReassuredOwl55
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12 Questions, 42 Answers
  Active since 10 January 2023
  Last activity 2 years ago

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42 × Eureka!
0 Votes
4 Answers
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[Datasets] is it possible to get an individual file from a dataset? Example would be accessing only a single feature from a feature store Dataset when it cou...
2 years ago
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7 Answers
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0 Votes 7 Answers 2K Views
[Pipeline] Hey, is it possible to specify the output uri for Pipelines and their Components using Pipeline decorators? I would like to store Pipeline artifac...
2 years ago
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3 Answers
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Do pandas pd.DataFrame s work with caching for Pipeline Components? I seem to be coming up against a weird issue where List[pd.DataFrame] is cached properly ...
2 years ago
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23 Answers
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How can I run a new version of a Pipeline, wait for it to finish and then check its completion/failure status? I want to kick off the pipeline and then check...
2 years ago
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0 Answers
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Hey, I’m thinking of using a ClearML Pipeline to compile a dataset more efficiently. My hope is that I won’t have to run every step for every data point ever...
2 years ago
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7 Answers
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0 Votes 7 Answers 2K Views
Outputs of final few colab notebook cells not logged Hey, We are creating a ClearML Task within a Google Colab notebook and using the Task, among other thing...
2 years ago
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5 Answers
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2 years ago
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Hey all, We are trying to clone a Task that uses custom pip installed packages and run it via an Agent. When running locally, we simply “ pip install ./path/...
2 years ago
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13 Answers
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0 Votes 13 Answers 2K Views
2 years ago
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2 years ago
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Trying to follow https://github.com/abiller/events/blob/webinars/videos/the_clear_show/S02/E05/dataset_edit_00.ipynb by GrittyStarfish67 and getting the foll...
2 years ago
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1 Answers
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2 years ago
0 How Can I Run A New Version Of A Pipeline, Wait For It To Finish And Then Check Its Completion/Failure Status? I Want To Kick Off The Pipeline And Then Check Completion

Yep, would be happy to run locally, but want to automate this so does running locally help with getting the pipeline run ID (programmatically)?

2 years ago
0 Outputs Of Final Few Colab Notebook Cells Not Logged

Hi John, we are using a self-hosted server with:

WebApp 1.9.2-317
Server: 1.9.2-317
API: 2.23

edit: clearml==1.11.0

2 years ago
0 How Can I Run A New Version Of A Pipeline, Wait For It To Finish And Then Check Its Completion/Failure Status? I Want To Kick Off The Pipeline And Then Check Completion

Basically, for a bit more context, this is part of an effort to incorporate ClearML Pipelines in a CI/CD framework. Changes to the pipeline script create_pipeline_a.py that are pushed to a GitHub master branch would trigger the build and testing of the pipeline.

And I’d rather the testing/validation etc lived outside of the ClearML Pipeline itself, as stated earlier – and that’s what your pseudo code allows, so if it’s possible that would be great. 🙂

2 years ago
0 How Can I Run A New Version Of A Pipeline, Wait For It To Finish And Then Check Its Completion/Failure Status? I Want To Kick Off The Pipeline And Then Check Completion

Sorry, I don’t understand how this helps with validating the pipeline run.
Where would the validation code sit?
And the ClearML Pipeline run needs to be available on the ClearML Server (at least as a draft) so that it can be marked as in-production and cloned in the future

2 years ago
0 How Can I Run A New Version Of A Pipeline, Wait For It To Finish And Then Check Its Completion/Failure Status? I Want To Kick Off The Pipeline And Then Check Completion

The pseudo-code you wrote previously is what would be required, I believe

be able to get the pipeline’s Task ID back at the end

This is the missing piece. We can’t perform validation without this, afaik

2 years ago
0 How Can I Run A New Version Of A Pipeline, Wait For It To Finish And Then Check Its Completion/Failure Status? I Want To Kick Off The Pipeline And Then Check Completion

Yep, that’s it. Obviously would be nice to not have to go via the shell but that’s by the by (edit: I don’t know of a way to build or run a new version of a pipeline without going via the shell, so this isn’t a big deal).

2 years ago
0 Hey All, We Are Trying To Clone A Task That Uses Custom Pip Installed Packages And Run It Via An Agent. When Running Locally, We Simply “

my colleague, @<1534706830800850944:profile|ZealousCoyote89> has been looking at this – I think he has used the relevant kwarg in the component decorator to specify the packages, and I think it worked but I’m not 100%. Connah?

2 years ago
0 Outputs Of Final Few Colab Notebook Cells Not Logged

Yes, sorry, the final cell has the flush followed by the close

2 years ago
0 Outputs Of Final Few Colab Notebook Cells Not Logged

I used task.flush(wait_for_uploads=True) in the final cell of the notebook

2 years ago
0 Trying To Follow

Ah ok. I’m guessing the state file is auto uploaded in the background? I haven’t kicked that off “intentionally”

2 years ago
0 How Can I Run A New Version Of A Pipeline, Wait For It To Finish And Then Check Its Completion/Failure Status? I Want To Kick Off The Pipeline And Then Check Completion

Sorry, I think something’s got lost in translation here, but thanks for the explanation.

Hopefully this is clearer:

  • Say we have a new ClearML pipeline as code on a new commit in our repo.
  • We want to build and run this new pipeline and have it available on the ClearML Server.
  • We want to run a suite of tests that validate/verify/etc the performance of this entire ClearML Pipeline, e.g. by having it run on a set of predefined inputs and checking the various artifacts that were creat...
2 years ago
0 [Pipeline] Am I Right In Saying A Pipeline Controller Can’T Include A Data-Dependent For-Loop? The Issue Is Not Spinning Up The Tasks, It’S Collecting The Results At The End. I Was Trying To Append The Outputs Of Each Iteration Of The For-Loop And Pass Th

I have already tested that the for loop does work, including caching, when spinning out multiple Tasks.

As I say, the issue is grouping the results of the tasks into a list and passing them into another step

2 years ago
0 [Pipeline] Am I Right In Saying A Pipeline Controller Can’T Include A Data-Dependent For-Loop? The Issue Is Not Spinning Up The Tasks, It’S Collecting The Results At The End. I Was Trying To Append The Outputs Of Each Iteration Of The For-Loop And Pass Th

Ahh okay.

I’m an absolute numpty.

I had enabled caching on the Pipeline Task that was grabbing a load of ClearML IDs and so it was trying to “get” datasets that had since been deleted.

Thanks for the nudge to minimal test – silly I didn’t do it before asking!

Appreciate your help.

2 years ago
0 How Can I Run A New Version Of A Pipeline, Wait For It To Finish And Then Check Its Completion/Failure Status? I Want To Kick Off The Pipeline And Then Check Completion

Thanks, I’ll check out those GitHub Actions examples but as you say, it’s the “template” step that is the key bit for this particular application.

the pipeline from tasks serializes itself to a configuration object that you can edit/create externally

I think if it has to come down to fiddling with lower-level objects, I’ll hold off for now and wait until something a bit more user-friendly comes along. Depends on how easy this is to work with.

This is something that we do need if we a...

2 years ago
0 [Pipeline] Hey, Is It Possible To Specify The Output Uri For Pipelines And Their Components Using Pipeline Decorators? I Would Like To Store Pipeline Artifacts And Component Artifacts On S3.

The return objects were stored to S3 but PipelineDecorator.upload_artifact still uploaded to the file server. Not sure what was up with that but as explained in my next comment it did work when I tried again.

It also seems that PipelineDecorator.upload_artifact is not compatible with caching, sadly, but that is another issue for another thread that I will be starting on Monday.

Have a good weekend

2 years ago
0 [Pipeline] Hey, Is It Possible To Specify The Output Uri For Pipelines And Their Components Using Pipeline Decorators? I Would Like To Store Pipeline Artifacts And Component Artifacts On S3.

I have added a lot of detail to this, sorry.

The inline comments in the code talk about that specific script/implementation.

I have added a lot of context in the doc string at the top.

2 years ago
0 Trying To Follow

from tempfile import mkdtemp new_folder = with_feature.get_mutable_local_copy(mkdtemp())It’s this line that causes the issue

2 years ago
0 How Can I Run A New Version Of A Pipeline, Wait For It To Finish And Then Check Its Completion/Failure Status? I Want To Kick Off The Pipeline And Then Check Completion

Do notice this will only work for pipelines from Tasks, is this a good fit for you?

The issue with this is that we would then presumably have to run/“build” each of the Tasks (pipeline steps) separately to put them on the ClearML server and then get their Task ID’s in order to even write the code for the Pipeline, which increases the complexity of any automated CI/CD flow. Correct me if I’m wrong.

Essentially, I think the key thing here is we want to be able to build the entire Pipe...

2 years ago
0 [Pipeline] Am I Right In Saying A Pipeline Controller Can’T Include A Data-Dependent For-Loop? The Issue Is Not Spinning Up The Tasks, It’S Collecting The Results At The End. I Was Trying To Append The Outputs Of Each Iteration Of The For-Loop And Pass Th

The Dataset object itself is not being passed around. The point of showing you that was to say that the Dataset may change and therefore the number of objects (loaded from the Dataset, eg a number of pandas DataFrames that were CSV’s in the dataset) could change

2 years ago
0 [Pipeline] Am I Right In Saying A Pipeline Controller Can’T Include A Data-Dependent For-Loop? The Issue Is Not Spinning Up The Tasks, It’S Collecting The Results At The End. I Was Trying To Append The Outputs Of Each Iteration Of The For-Loop And Pass Th

e.g. pseudo for illustration only
` def get_list(dataset_id):
from clearml import Dataset
ds= Dataset.get(dataset_id=dataset_id)
ds_dir=ds.get_local_copy()
etc...
return list_of_objs # one for each file, for example

def pipeline(dataset_id):
list_of_obj = get_list(dataset_id)
list_of_results = []
for obj in list_of_obj:
list_of_results.append(step(obj))
combine(list_of_results) `One benefit is being able to make use of the Pipeline caching so if ne...

2 years ago
0 Hey All, We Are Trying To Clone A Task That Uses Custom Pip Installed Packages And Run It Via An Agent. When Running Locally, We Simply “

To illustrate, here’s an example repo:

repo/
    package1/
    package2/ # installed separately to package1
    task_script.py # requires package1 and package2 to have been pip installed
    
2 years ago
0 Do Pandas

I am using the PipelineDecorator form of the pipeline and I am passing arguments as function arguments to the pipeline components

2 years ago
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