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Answered
Hi Guys, I Have Problem Understanding To Set Requirements.Txt And Running Remotelty Using Clearml-Agent. So I Tried To Set Requirements, And Want To Execute Remotely. When In Draft Mode, The Installed Package Is Correct And Match Like Requirements.Txt, Bu

Hi guys,
i have problem understanding to set requirements.txt and running remotelty using clearml-agent.
so i tried to set requirements, and want to execute remotely. when in draft mode, the Installed Package is correct and match like requirements.txt, but when i do enqueue and start install the package, they change and not found module clearml.

here is my code to initiate.

import os
import sys
os.environ['PYTHONPATH'] = os.getcwd()
sys.path.append(os.getcwd())

from clearml import Task, OutputModel, StorageManager
from dataclasses import asdict
import pytorch_lightning as pl
from pytorch_lightning.callbacks import ModelCheckpoint, EarlyStopping, LearningRateMonitor
from src.net import Classifier
from src.data import ImageDataModule
from src.utils import download_data, override_config, read_json, read_yaml, get_classes_from_s3_folder
from config.train_config import TrainingConfig
from src.schema import Report
import torch
from rich import print

#region SETUP CLEARML
cwd = os.getcwd()

conf = TrainingConfig()
conf_copy = TrainingConfig()
report = Report()


req_path = os.path.join(cwd,'docker/requirements.train.txt') 
Task.force_requirements_env_freeze(False, req_path)
# Task.add_requirements(req_path)
task = Task.init(
    project_name='Template/Image-Classifier',
    task_name='Training',
    task_type=Task.TaskTypes.training,
    auto_connect_frameworks=False,
    output_uri=conf.OUTPUT_URI,
)
Task.current_task().set_script(
    repository='
',
    branch='master',
    working_dir='.',
    entry_point='src/train.py'
)
Task.current_task().set_base_docker(docker_image='nvidia/cuda:11.3.0-cudnn8-runtime-ubuntu20.04')
Task.current_task().execute_remotely()

this will produce Draft mode, right? and the installed packeges shows:

# Python 3.7.13 (default, Mar 29 2022, 02:18:16)  [GCC 7.5.0]

-f 

torch==1.12.1+cu113
torchvision==0.13.1+cu113
clearml
boto3==1.24.66
torchmetrics==0.10.3
torchtext==0.13.1
pytorch-lightning==1.8.3.post1
timm==0.6.11
opencv-python-headless==4.6.0.66
albumentations==1.2.1
pandas
matplotlib
ipython
tqdm
plotly
nbformat
rich
pyhocon==0.3.59

but i do enqueue and found the error

Successfully installed Cython-0.29.33
Adding venv into cache: /mnt/hdd_2/clearml-cache/venvs-builds/3.8
Running task id [1dae62e287b64908922e960395fda45c]:
[.]$ /mnt/hdd_2/clearml-cache/venvs-builds/3.8/bin/python -u src/train.py
Summary - installed python packages:
pip:
- attrs==22.2.0
- certifi==2022.12.7
- charset-normalizer==3.0.1
- Cython==0.29.33
- distlib==0.3.6
- filelock==3.9.0
- furl==2.1.3
- idna==3.4
- importlib-resources==5.10.2
- jsonschema==4.17.3
- orderedmultidict==1.0.1
- pathlib2==2.3.7.post1
- pkgutil_resolve_name==1.3.10
- platformdirs==3.0.0
- psutil==5.9.4
- PyJWT==2.6.0
- pyparsing==3.0.9
- pyrsistent==0.19.3
- python-dateutil==2.8.2
- PyYAML==6.0
- requests==2.28.2
- six==1.16.0
- urllib3==1.26.14
- virtualenv==20.19.0
- zipp==3.12.1
Environment setup completed successfully
Starting Task Execution:
Traceback (most recent call last):
  File "src/train.py", line 6, in <module>
    from clearml import Task, OutputModel, StorageManager
ModuleNotFoundError: No module named 'clearml'

and after that, the section Installed Packeges in Execution change:

attrs==22.2.0
certifi==2022.12.7
charset-normalizer==3.0.1
Cython==0.29.33
distlib==0.3.6
filelock==3.9.0
furl==2.1.3
idna==3.4
importlib-resources==5.10.2
jsonschema==4.17.3
orderedmultidict==1.0.1
pathlib2==2.3.7.post1
pkgutil_resolve_name==1.3.10
platformdirs==3.0.0
psutil==5.9.4
PyJWT==2.6.0
pyparsing==3.0.9
pyrsistent==0.19.3
python-dateutil==2.8.2
PyYAML==6.0
requests==2.28.2
six==1.16.0
urllib3==1.26.14
virtualenv==20.19.0
zipp==3.12.1

which is different with my requirements.txt.

Thanks in Advance!

  
  
Posted one year ago
Votes Newest

Answers 7


Hi @<1523701260895653888:profile|QuaintJellyfish58> , can you please provide a standalone snippet that reproduces this?

  
  
Posted one year ago

Hi @<1523701070390366208:profile|CostlyOstrich36>
i attach for complete log

here my structure:

.
├── app
│   ├── backend
│   └── frontend
├── assets
│   ├── demo-app-sample.png
│   └── workflow.png
├── config
│   ├── clearml.conf
│   ├── list_models.py
│   ├── list_optimizer.py
│   ├── __pycache__
│   └── train_config.py
├── docker
│   ├── Dockerfile
│   ├── Dockerfile.app
│   ├── requirements.prod.txt
│   ├── requirements.train.txt
│   └── requirements.txt
├── lightning_logs
├── Makefile
├── notebooks
│   ├── corat-coret.ipynb
│   └── tmp
├── README.md
├── src
│   ├── data.py
│   ├── net.py
│   ├── __pycache__
│   ├── schema.py
│   ├── test.py
│   ├── train.py
│   └── utils.py
└── test.json
  
  
Posted one year ago

Hi @<1523701070390366208:profile|CostlyOstrich36> , i think can try this to run it as standalone:

  
  
Posted one year ago

Hi @<1523701070390366208:profile|CostlyOstrich36> , just want to update,
this is solve by

  • remove
-f 
  1. change Task.force_requirements_env_freeze(False, req_path) -> Task.add_requirements(req_path)
  2. change my clearml-agent settings
  
  
Posted one year ago

    from src.net import Classifier
ModuleNotFoundError: No module named 'src'

hmm yeah i think, this is not possible to share a whole script here.

  
  
Posted one year ago

i attach train.py here,
and to run it i do python src/train.py

  
  
Posted one year ago

    from src.net import Classifier
ModuleNotFoundError: No module named 'src'
  
  
Posted one year ago
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7 Answers
one year ago
one year ago
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