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Answered
What Sort Of Integration Is Possible With Clearml And Sagemaker? On The Page

What sort of integration is possible with ClearML and SageMaker? On the page describing ClearML Remote it says:

Create a remote development environment (e.g. AWS SageMaker, GCP CoLab, etc.) on any on-prem machine or any cloud.

But the only mention of SageMaker I see in the docs is the release notes for 0.13 saying "Add support for SageMaker".

I have SageMaker Studio up and running with access to my ClearML server and it's successfully able to log plots and scalars from experiments, but in terms of code it just logs the code used to launch the kernel:

"""Entry point for launching an IPython kernel.
This is separate from the ipykernel package so we can avoid doing imports until
after removing the cwd from sys.path.
"""
import sys

if __name__ == '__main__':
    # Remove the CWD from sys.path while we load stuff.
    # This is added back by InteractiveShellApp.init_path()
    if sys.path[0] == '':
        del sys.path[0]
    from ipykernel import kernelapp as app
    app.launch_new_instance()

Is it possible to capture more than that while using SageMaker?

  
  
Posted one year ago
Votes Newest

Answers 77


that fails

  
  
Posted one year ago

if I change it to 0.0.0.0 it works

  
  
Posted one year ago

one possibility for getting the notebook filepath is finding and parsing /home/sagemaker-user/.jupyter/lab/workspaces/default-37a8.jupyterlab-workspace I think, but I don't know if I can tie that to a specific session

  
  
Posted one year ago

Try to add here:
None

server_info['url'] = f"http://{server_info['hostname']}:{server_info['port']}/"
  
  
Posted one year ago

but maybe that doesn't matter, actually - it might be one session per host I guess

  
  
Posted one year ago

yeah, even then it'll run but return 0 notebooks

  
  
Posted one year ago

so notebook path is empty

  
  
Posted one year ago

and this

server_info['url'] = f"http://{server_info['hostname']}:{server_info['port']}/{server_info['base_url']}/"
  
  
Posted one year ago

if I add the base_url it's not found

  
  
Posted one year ago

image

  
  
Posted one year ago

Hmm and you are getting empty list for thi one:

server_info['url'] = f"http://{server_info['hostname']}:{server_info['port']}/"
  
  
Posted one year ago

yep

  
  
Posted one year ago

so my reading of the jupyter-kernel-gateway docs is that each session is containerized, so each notebook "session" is totally isolated

  
  
Posted one year ago

weird that it won't return that single session

  
  
Posted one year ago

but one possible workaround is to try to figure out if it's running in a gateway and then find the only notebook running on that server

  
  
Posted one year ago

I think it just ends up in /home/sagemaker-user/{notebook}.ipynb every time

  
  
Posted one year ago

What happens when you call:

from clearml.backend_interface.task.repo import ScriptInfo

print(ScriptInfo._ScriptInfo__legacy_jupyter_notebook_server_json_parsing(None))
  
  
Posted one year ago

image

  
  
Posted one year ago

looks like the same as in server_info

  
  
Posted one year ago

print(requests.get(url='

print(requests.get(url='
  
  
Posted one year ago

image

  
  
Posted one year ago

still empty
image

  
  
Posted one year ago

This is very odd ... let me check something

  
  
Posted one year ago

print(os.environ)
  
  
Posted one year ago

environ{'PYTHONNOUSERSITE': '0',
        'HOSTNAME': 'gfp-science-ml-t3-medium-d579233e8c4b53bc5ad626f2b385',
        'AWS_CONTAINER_CREDENTIALS_RELATIVE_URI': '/_sagemaker-instance-credentials/xxx',
        'JUPYTER_PATH': '/usr/share/jupyter/',
        'SAGEMAKER_LOG_FILE': '/var/log/studio/kernel_gateway.log',
        'PATH': '/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/tmp/miniconda3/condabin:/tmp/anaconda3/condabin:/tmp/miniconda2/condabin:/tmp/anaconda2/condabin',
        'REGION_NAME': 'us-east-1',
        'AWS_INTERNAL_IMAGE_OWNER': 'Custom',
        'AWS_DEFAULT_REGION': 'us-east-1',
        'PWD': '/home/sagemaker-user',
        'AWS_REGION': 'us-east-1',
        'SHLVL': '1',
        'HOME': '/home/sagemaker-user',
        'AWS_SAGEMAKER_PYTHONNOUSERSITE': '0',
        'AWS_ACCOUNT_ID': 'xxx',
        '_': '/opt/.sagemakerinternal/conda/bin/jupyter-kernelgateway',
        'LC_CTYPE': 'C.UTF-8',
        'KERNEL_LAUNCH_TIMEOUT': '40',
        'KERNEL_WORKING_PATH': '',
        'KERNEL_GATEWAY': '1',
        'JPY_PARENT_PID': '9',
        'PYDEVD_USE_FRAME_EVAL': 'NO',
        'TERM': 'xterm-color',
        'CLICOLOR': '1',
        'FORCE_COLOR': '1',
        'CLICOLOR_FORCE': '1',
        'PAGER': 'cat',
        'GIT_PAGER': 'cat',
        'MPLBACKEND': '
_inline'}
  
  
Posted one year ago

as best I can tell it'll only have one .ipynb in $HOME with this setup, which may work...

  
  
Posted one year ago

nope, that's wrong

  
  
Posted one year ago

if I use the same kernel there'll be two

  
  
Posted one year ago

but even then the sessions endpoint is still empty

  
  
Posted one year ago

Hmm what do you have here?

os.system("cat /var/log/studio/kernel_gateway.log")
  
  
Posted one year ago
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