My typos are killing us, apologies :
change -t to -it it will make it interactive (i.e. you can use bash 🙂 )
Hi SmallDeer34
I need some help what is the difference between the manual one and the automatic one ?
from your previous log, this is the bash command executed inside the container, can you try to "step by step" try to catch who/what is messing it up ?docker run -it --gpus "device=1" -e CLEARML_WORKER_ID=Gandalf:gpu1 -e CLEARML_DOCKER_IMAGE=nvidia/cuda:11.4.0-devel-ubuntu18.04 -v /home/dwhitena/.git-credentials:/root/.git-credentials -v /home/dwhitena/.gitconfig:/root/.gitconfig -v /tmp/.clearml_agent.7rjdh80a.cfg:/root/clearml.conf -v /tmp/clearml_agent.ssh.ppsd9sze:/root/.ssh -v /home/dwhitena/.clearml/apt-cache.1:/var/cache/apt/archives -v /home/dwhitena/.clearml/pip-cache:/root/.cache/pip -v /home/dwhitena/.clearml/pip-download-cache:/root/.clearml/pip-download-cache -v /home/dwhitena/.clearml/cache:/clearml_agent_cache -v /home/dwhitena/.clearml/vcs-cache:/root/.clearml/vcs-cache --rm nvidia/cuda:11.4.0-devel-ubuntu18.04 bash -c echo \'Binary::apt::APT::Keep-Downloaded-Packages "true";\' > /etc/apt/apt.conf.d/docker-clean ; chown -R root /root/.cache/pip ; export DEBIAN_FRONTEND=noninteractive ; export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL libsm6 libxext6 libxrender-dev libglib2.0-0" ; [ ! -z $(which git) ] || export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL git" ; declare LOCAL_PYTHON ; for i in {10..5}; do which python3.$i && python3.$i -m pip --version && export LOCAL_PYTHON=$(which python3.$i) && break ; done ; [ ! -z $LOCAL_PYTHON ] || export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL python3-pip" ; [ -z "$CLEARML_APT_INSTALL" ] || (apt-get update && apt-get install -y $CLEARML_APT_INSTALL) ; [ ! -z $LOCAL_PYTHON ] || export LOCAL_PYTHON=python3 ; $LOCAL_PYTHON -m pip install -U "pip<20.2" ; $LOCAL_PYTHON -m pip install -U clearml-agent ; cp /root/clearml.conf /root/default_clearml.conf ; NVIDIA_VISIBLE_DEVICES=all $LOCAL_PYTHON -u -m clearml_agent execute --disable-monitoring --id 1e876021bbef49a291d66ac9a2270705
Maybe as a first start I would try:docker run -it --gpus "device=1" -e CLEARML_WORKER_ID=Gandalf:gpu1 -e CLEARML_DOCKER_IMAGE=nvidia/cuda:11.4.0-devel-ubuntu18.04 -v /home/dwhitena/.git-credentials:/root/.git-credentials -v /home/dwhitena/.gitconfig:/root/.gitconfig -v /tmp/.clearml_agent.7rjdh80a.cfg:/root/clearml.conf -v /tmp/clearml_agent.ssh.ppsd9sze:/root/.ssh -v /home/dwhitena/.clearml/apt-cache.1:/var/cache/apt/archives -v /home/dwhitena/.clearml/pip-cache:/root/.cache/pip -v /home/dwhitena/.clearml/pip-download-cache:/root/.clearml/pip-download-cache -v /home/dwhitena/.clearml/cache:/clearml_agent_cache -v /home/dwhitena/.clearml/vcs-cache:/root/.clearml/vcs-cache --rm nvidia/cuda:11.4.0-devel-ubuntu18.04 bash
AgitatedDove14 Ok, ran your last docker run now I'm interactive in the container. What's next?
Yes please, just to verify my hunch.
I think that somehow the docker mounts the agent is creating are (for some reason) messing it up.
Basically you can just run the following (it will do everything automatically) (replace the <TASK_ID_HERE> with the actual one)docker run -it --gpus "device=1" -e CLEARML_WORKER_ID=Gandalf:gpu1 -e CLEARML_DOCKER_IMAGE=nvidia/cuda:11.4.0-devel-ubuntu18.04 -v /home/dwhitena/.git-credentials:/root/.git-credentials -v /home/dwhitena/.gitconfig:/root/.gitconfig -v /tmp/.clearml_agent.7rjdh80a.cfg:/root/clearml.conf -v /tmp/clearml_agent.ssh.ppsd9sze:/root/.ssh -v /home/dwhitena/.clearml/apt-cache.1:/var/cache/apt/archives -v /home/dwhitena/.clearml/pip-cache:/root/.cache/pip -v /home/dwhitena/.clearml/pip-download-cache:/root/.clearml/pip-download-cache -v /home/dwhitena/.clearml/cache:/clearml_agent_cache -v /home/dwhitena/.clearml/vcs-cache:/root/.clearml/vcs-cache --rm nvidia/cuda:11.4.0-devel-ubuntu18.04 bash -c echo \'Binary::apt::APT::Keep-Downloaded-Packages "true";\' > /etc/apt/apt.conf.d/docker-clean ; chown -R root /root/.cache/pip ; export DEBIAN_FRONTEND=noninteractive ; export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL libsm6 libxext6 libxrender-dev libglib2.0-0" ; [ ! -z $(which git) ] || export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL git" ; declare LOCAL_PYTHON ; for i in {10..5}; do which python3.$i && python3.$i -m pip --version && export LOCAL_PYTHON=$(which python3.$i) && break ; done ; [ ! -z $LOCAL_PYTHON ] || export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL python3-pip" ; [ -z "$CLEARML_APT_INSTALL" ] || (apt-get update && apt-get install -y $CLEARML_APT_INSTALL) ; [ ! -z $LOCAL_PYTHON ] || export LOCAL_PYTHON=python3 ; $LOCAL_PYTHON -m pip install -U "pip<20.2" ; $LOCAL_PYTHON -m pip install -U clearml-agent ; cp /root/clearml.conf /root/default_clearml.conf ; NVIDIA_VISIBLE_DEVICES=all $LOCAL_PYTHON -u -m clearml_agent execute --disable-monitoring --id <TASK_UD_HERE>
Dang, I just closed the docker session. Should I open it again and try your command again?
Yes my bad 😞
Let's try again:docker run -it --gpus "device=1" -e CLEARML_WORKER_ID=Gandalf:gpu1 -e CLEARML_DOCKER_IMAGE=nvidia/cuda:11.4.0-devel-ubuntu18.04 -v /home/dwhitena/.git-credentials:/root/.git-credentials -v /home/dwhitena/.gitconfig:/root/.gitconfig -v /tmp/.clearml_agent.7rjdh80a.cfg:/root/clearml.conf -v /tmp/clearml_agent.ssh.ppsd9sze:/root/.ssh -v /home/dwhitena/.clearml/apt-cache.1:/var/cache/apt/archives -v /home/dwhitena/.clearml/pip-cache:/root/.cache/pip -v /home/dwhitena/.clearml/pip-download-cache:/root/.clearml/pip-download-cache -v /home/dwhitena/.clearml/cache:/clearml_agent_cache -v /home/dwhitena/.clearml/vcs-cache:/root/.clearml/vcs-cache --rm nvidia/cuda:11.4.0-devel-ubuntu18.04 bashThen inside the docker:echo \'Binary::apt::APT::Keep-Downloaded-Packages "true";\' > /etc/apt/apt.conf.d/docker-clean ; chown -R root /root/.cache/pip ; export DEBIAN_FRONTEND=noninteractive ; export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL libsm6 libxext6 libxrender-dev libglib2.0-0" ; [ ! -z $(which git) ] || export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL git" ; declare LOCAL_PYTHON ; for i in {10..5}; do which python3.$i && python3.$i -m pip --version && export LOCAL_PYTHON=$(which python3.$i) && break ; done ; [ ! -z $LOCAL_PYTHON ] || export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL python3-pip" ; [ -z "$CLEARML_APT_INSTALL" ] || (apt-get update && apt-get install -y $CLEARML_APT_INSTALL) ; [ ! -z $LOCAL_PYTHON ] || export LOCAL_PYTHON=python3 ; $LOCAL_PYTHON -m pip install -U "pip<20.2" ; $LOCAL_PYTHON -m pip install -U clearml-agent ; cp /root/clearml.conf /root/default_clearml.conf ; NVIDIA_VISIBLE_DEVICES=all $LOCAL_PYTHON -u -m clearml_agent execute --disable-monitoring --id 1e876021bbef49a291d66ac9a2270705
it's one where I reset it, and cleared out the Installed Packages to only have transformers @ git+ https://github.com/huggingface/transformers@61c506349134db0a0a2fd6fb2eff8e29a2f84e79 in it.
Okay now let's try the final lines:$LOCAL_PYTHON -m virtualenv /root/venv /root/venv/bin/python3 -m pip install git+
1e876021bbef49a291d66ac9a2270705 just make sure you reset it 🙂
Ohh, yes, we need to map the correct clearml.conf, sorry, try (I fixed both clearml.conf mapping and ,ssh folder mapping):docker run -t --gpus "device=1" -e CLEARML_WORKER_ID=Gandalf:gpu1 -e CLEARML_DOCKER_IMAGE=nvidia/cuda:11.4.0-devel-ubuntu18.04 -v /home/dwhitena/.git-credentials:/root/.git-credentials -v /home/dwhitena/.gitconfig:/root/.gitconfig -v /home/dwhitena/clearml.conf:/root/clearml.conf -v /home/dwhitena/.ssh:/root/.ssh -v /home/dwhitena/.clearml/apt-cache.1:/var/cache/apt/archives -v /home/dwhitena/.clearml/pip-cache:/root/.cache/pip -v /home/dwhitena/.clearml/pip-download-cache:/root/.clearml/pip-download-cache -v /home/dwhitena/.clearml/cache:/clearml_agent_cache -v /home/dwhitena/.clearml/vcs-cache:/root/.clearml/vcs-cache --rm nvidia/cuda:11.4.0-devel-ubuntu18.04 bash
in the UI, find the task (just search for the Task ID, it will find it), then tight click it, and select "reset"
SmallDeer34 can you get me a TASK ID of one of the jobs that failed for you?
Hmmm...clearml_agent: ERROR: Could not find task id=1e876021bbef49a291d66ac9a2270705 (for host: )
I think that what happened was you are running it on the host machine (not inside the docker)
I probably missed a " somewhere
Hmmmm.... when I run that command AgitatedDove14 I can't seem to do anything in the resulting shell. It just hangs on any command (including things like ls etc.)
Wait IrritableOwl63 this looks like ti worked, am I right ? huggingface was correctly installed
Let's try:echo 'Binary::apt::APT::Keep-Downloaded-Packages "true";' > /etc/apt/apt.conf.d/docker-clean ; chown -R root /root/.cache/pip ; export DEBIAN_FRONTEND=noninteractive ; export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL libsm6 libxext6 libxrender-dev libglib2.0-0" ; [ ! -z $(which git) ] || export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL git" ; declare LOCAL_PYTHON ; for i in {10..5}; do which python3.$i && python3.$i -m pip --version && export LOCAL_PYTHON=$(which python3.$i) && break ; done ; [ ! -z $LOCAL_PYTHON ] || export CLEARML_APT_INSTALL="$CLEARML_APT_INSTALL python3-pip" ; [ -z "$CLEARML_APT_INSTALL" ] || (apt-get update && apt-get install -y $CLEARML_APT_INSTALL) ; [ ! -z $LOCAL_PYTHON ] || export LOCAL_PYTHON=python3 ; $LOCAL_PYTHON -m pip install -U "pip<20.2" ; $LOCAL_PYTHON -m pip install -U clearml-agent
Can you send the console output of this entire session please ?
Also in the same open docker session, can you try:$LOCAL_PYTHON -m clearml_agent execute --disable-monitoring --id <task_id_here>Where the Task ID is one of the failed executions (only reset it before)
But from the log it seems that:
you are not running as root in the docker? Python3.8 is installed (and not python 3.6 as before)