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I Am Using Clearml Pro And Pretty Regularly I Will Restart An Experiment And Nothing Will Get Logged To Clearml. It Shows The Experiment Running (For Days) And It'S Running Fine On The Pc But No Scalers Or Debug Samples Are Shown. How Do We Troubleshoot T

I am using ClearML Pro and pretty regularly I will restart an experiment and nothing will get logged to ClearML. It shows the experiment running (for days) and it's running fine on the PC but no scalers or debug samples are shown.
How do we troubleshoot this?

  
  
Posted one year ago
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Answers 69


The machine currently having the issue is on tensorboard==2.16.2

  
  
Posted one year ago

Thanks @<1719524641879363584:profile|ThankfulClams64> having a code that can reproduce it is exactly what we need.
One thing I might have missed and is very important , what is your tensorboard package version?

  
  
Posted one year ago

sometimes I get no scalars, but the console logging always seems to be working

  
  
Posted one year ago

Okay I will do another run to capture the console output. We currently set auto_connect_streams to False to reduce the number of API calls. So there isn't really anything in the ClearML task page console section

  
  
Posted one year ago

The same training works sometimes. But I'm not sure how to troubleshoot when it stops logging the metrics

  
  
Posted one year ago

Any chance you have some uncommited code changes that, when not included, this works fine?

  
  
Posted one year ago

I am on 1.16.2

    task = Task.init(project_name=model_config['ClearML']['project_name'],
                     task_name=model_config['ClearML']['task_name'],
                     continue_last_task=False,
                     auto_connect_streams=True)
  
  
Posted one year ago

I'm not sure if it still reports logs. But it will continue running on the machine

  
  
Posted one year ago

So even if you abort it on the start of the experiment it will keep running and reporting logs?

  
  
Posted one year ago

Hi @<1719524641879363584:profile|ThankfulClams64> , does the experiment itself show on the ClearML UI?

  
  
Posted one year ago

No it completes and exists the script

  
  
Posted one year ago

That makes sense... If you turn auto_connect_streams to false this mean that auto reporting will be disabled as per the documentation.. If you turn it to True then logging should resume.

  
  
Posted one year ago

Yes it is logging to the console. The script does hang whenever it completes all the epochs when it is having the issue.

  
  
Posted one year ago

I do have uncommitted code changes. I can try to check at some point if it would not have the problem without them. It seems like it could be repeated just by making a git repo with that script and adding a very large file. If I can repeat it is it best to open an issue in GitHub?

  
  
Posted one year ago

It is still getting stuck. I think the issue might have something to do with the iterations versus epochs. I notice that one of the scalars that gets logged early is logging the epoch while the remaining scalars seem to be iterations because the iteration value is 1355 instead of 26

  
  
Posted one year ago

It is not always reproducible it seems like something that we do not understand happens then the machine consistently has this issue. We believe it has something to do with stopping and starting experiments

  
  
Posted one year ago

I'm not sure how to even troubleshoot this.

  
  
Posted one year ago

@<1719524641879363584:profile|ThankfulClams64> , if you set auto_connect_streams to false nothing will be reported from your frameworks. With what frameworks are you working, tensorboard?

  
  
Posted one year ago

If you remove any reference of ClearML from the code on that machine, does it still hang?

  
  
Posted one year ago

The console logging still works. Aborting the task was in the log but did not work and the process continued until I killed it.

  
  
Posted one year ago

I am using 1.15.0. Yes I can try with auto_connect_streams set to True I believe I will still have the issue

  
  
Posted one year ago

I created an issue: None

  
  
Posted one year ago

So I was able to repeat the same behavior on a machine running this example None

by adding the following callback

class TensorBoardImage(TensorBoard):
    @staticmethod
    def make_image(tensor):
        from PIL import Image
        import io
        tensor = np.stack((tensor, tensor, tensor), axis=2)
        height, width, channels = tensor.shape
        image = Image.fromarray(tensor)
        output = io.BytesIO()
        image.save(output, format='PNG')
        image_string = output.getvalue()
        output.close()
        return tf.Summary.Image(height=height,
                                width=width,
                                colorspace=channels,
                                encoded_image_string=image_string)

    def on_epoch_end(self, epoch, logs=None):
        if logs is None:
            logs = {}
        super(TensorBoardImage, self).on_epoch_end(epoch, logs)
        images = self.validation_data[0]  # 0 - data; 1 - labels
        img = (255 * images[0].reshape(28, 28)).astype('uint8')

        image = self.make_image(img)
        summary = tf.Summary(value=[tf.Summary.Value(tag='image', image=image)])
        self.writer.add_summary(summary, epoch)

So it seems like there is some bug in the how ClearML is logging tensorbaord images that causes everything to fail

  
  
Posted one year ago

When I try to abort an experiment. I get this in the log

clearml.Task - WARNING - ### TASK STOPPED - USER ABORTED - STATUS CHANGED ###

but it does not stop anything it just continues to run

  
  
Posted one year ago

Hi @<1719524641879363584:profile|ThankfulClams64> , stopping all processes should do that, there is no programmatic way of doing that specifically. Did you try calling task.close() for all tasks you're using?

  
  
Posted one year ago

Is there someway to kill all connections of a machine to the ClearML server this does seem to be related to restarting a task / running a new task quickly after a task fails or is aborted

  
  
Posted one year ago

Running clearml_example.py in None reproduces the issue

  
  
Posted one year ago

It seems similar to this None is it possible saving too many model weights causes metric logging thread to die?

  
  
Posted one year ago

@<1719524641879363584:profile|ThankfulClams64> you could try using the compare function in the UI to compare the experiments on the machine the scalars are not reported properly and the experiments on a machine that runs the experiments properly. I suggest then replicating the environment exactly on the problematic machine. None

  
  
Posted one year ago

Yes it shows on the UI and has the first epoch for some of the metrics but that's it. It has run like 50 epochs, it says it is still running but there are no updates to the scalars or debug samples

  
  
Posted one year ago
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