Examples: query, "exact match", wildcard*, wild?ard, wild*rd
Fuzzy search: cake~ (finds cakes, bake)
Term boost: "red velvet"^4, chocolate^2
Field grouping: tags:(+work -"fun-stuff")
Escaping: Escape characters +-&|!(){}[]^"~*?:\ with \, e.g. \+
Range search: properties.timestamp:[1587729413488 TO *] (inclusive), properties.title:{A TO Z}(excluding A and Z)
Combinations: chocolate AND vanilla, chocolate OR vanilla, (chocolate OR vanilla) NOT "vanilla pudding"
Field search: properties.title:"The Title" AND text
Answered
I Am Using Clearml Pro And Pretty Regularly I Will Restart An Experiment And Nothing Will Get Logged To Clearml. It Shows The Experiment Running (For Days) And It'S Running Fine On The Pc But No Scalers Or Debug Samples Are Shown. How Do We Troubleshoot T

I am using ClearML Pro and pretty regularly I will restart an experiment and nothing will get logged to ClearML. It shows the experiment running (for days) and it's running fine on the PC but no scalers or debug samples are shown.
How do we troubleshoot this?

  
  
Posted 4 months ago
Votes Newest

Answers 69


Hi @<1719524641879363584:profile|ThankfulClams64> ! What tensorflow/keras version are you using? I noticed that in the TensorBoardImage you are using tf.Summary which no longer exists since tensorflow 2.2.3 , which I believe is too old to work with tesorboard==2.16.2.
Also, how are you stopping and starting the experiments? When starting an experiment, are you resuming training? In that case, you might want to consider setting the initial iteration to the last iteration your program reported

  
  
Posted 3 months ago

So I was able to repeat the same behavior on a machine running this example None

by adding the following callback

class TensorBoardImage(TensorBoard):
    @staticmethod
    def make_image(tensor):
        from PIL import Image
        import io
        tensor = np.stack((tensor, tensor, tensor), axis=2)
        height, width, channels = tensor.shape
        image = Image.fromarray(tensor)
        output = io.BytesIO()
        image.save(output, format='PNG')
        image_string = output.getvalue()
        output.close()
        return tf.Summary.Image(height=height,
                                width=width,
                                colorspace=channels,
                                encoded_image_string=image_string)

    def on_epoch_end(self, epoch, logs=None):
        if logs is None:
            logs = {}
        super(TensorBoardImage, self).on_epoch_end(epoch, logs)
        images = self.validation_data[0]  # 0 - data; 1 - labels
        img = (255 * images[0].reshape(28, 28)).astype('uint8')

        image = self.make_image(img)
        summary = tf.Summary(value=[tf.Summary.Value(tag='image', image=image)])
        self.writer.add_summary(summary, epoch)

So it seems like there is some bug in the how ClearML is logging tensorbaord images that causes everything to fail

  
  
Posted 3 months ago

It is not always reproducible it seems like something that we do not understand happens then the machine consistently has this issue. We believe it has something to do with stopping and starting experiments

  
  
Posted 3 months ago

Any chance you have some uncommited code changes that, when not included, this works fine?

  
  
Posted 3 months ago

I'll update my clearml version. Unfortunately I do not have a small code snippet and it is not always repeatable. Is there some additional logging that can be turned on?

  
  
Posted 4 months ago

Thanks @<1719524641879363584:profile|ThankfulClams64> having a code that can reproduce it is exactly what we need.
One thing I might have missed and is very important , what is your tensorboard package version?

  
  
Posted 3 months ago

Thank you @<1719524641879363584:profile|ThankfulClams64> for opening the GI, hopefully we will be able to reproduce it and fox ot quickly

  
  
Posted 3 months ago

Hi @<1719524641879363584:profile|ThankfulClams64> , does the experiment itself show on the ClearML UI?

  
  
Posted 4 months ago

@<1719524641879363584:profile|ThankfulClams64> , if you set auto_connect_streams to false nothing will be reported from your frameworks. With what frameworks are you working, tensorboard?

  
  
Posted 4 months ago

Okay I will do another run to capture the console output. We currently set auto_connect_streams to False to reduce the number of API calls. So there isn't really anything in the ClearML task page console section

  
  
Posted 4 months ago

The same training works sometimes. But I'm not sure how to troubleshoot when it stops logging the metrics

  
  
Posted 4 months ago

Can you try with auto_connect_streams=True ? Also, what version of clearml sdk are you using?

  
  
Posted 4 months ago

Yea I am fine not having the console logging. My issues is the scalers and debug images occasionally don't record to ClearML

  
  
Posted 4 months ago

That makes sense... If you turn auto_connect_streams to false this mean that auto reporting will be disabled as per the documentation.. If you turn it to True then logging should resume.

  
  
Posted 4 months ago

Correct, so I get something like this

ClearML Task: created new task id=6ec57dcb007545aebc4ec51eb5b34c67
======> WARNING! Git diff too large to store (2536kb), skipping uncommitted changes <======
ClearML results page: 

but that is all

  
  
Posted 4 months ago

Console output and also what you get on the ClearML task page under the console section

  
  
Posted 4 months ago

Is this just the console output while training?

  
  
Posted 4 months ago

Can you share any of the logs?

  
  
Posted 4 months ago

Yes it is logging to the console. The script does hang whenever it completes all the epochs when it is having the issue.

  
  
Posted 3 months ago

I found that setting store_uncommitted_code_diff: false instead of true seems to fix the issue

  
  
Posted 3 months ago

I'm not sure if it still reports logs. But it will continue running on the machine

  
  
Posted 3 months ago

When the script is hung at the end the experiment says failed in ClearML

  
  
Posted 3 months ago

I just created a new virtual environment and the problem persists. There are only two dependencies clearml and tensorflow. @<1523701070390366208:profile|CostlyOstrich36> what logs are you referring to?

  
  
Posted 3 months ago

Does any exit code appear? What is the status message and status reason in the 'INFO' section?

  
  
Posted 3 months ago

Another thing I notice is that aborting the experiment does not work when this is happening. It just continues to run

  
  
Posted 3 months ago

Yes I see it in the terminal on the machine

  
  
Posted 3 months ago

It was working for me. Anyway I modified the callback. Attached is the script that has the issue for me whenever I add random_image_logger to the callbacks It only logs some of the scalars for 1 epoch. It then is stuck and never recovers. When I remove random_image_logger the scalars are correctly logged. Again this only on 1 computer, other computers we have logging work perfectly fine

  
  
Posted 3 months ago

Do you also see the same in the terminal itself on the machine?

  
  
Posted 3 months ago

Hi @<1719524641879363584:profile|ThankfulClams64> , stopping all processes should do that, there is no programmatic way of doing that specifically. Did you try calling task.close() for all tasks you're using?

  
  
Posted 3 months ago

@<1719524641879363584:profile|ThankfulClams64> you could try using the compare function in the UI to compare the experiments on the machine the scalars are not reported properly and the experiments on a machine that runs the experiments properly. I suggest then replicating the environment exactly on the problematic machine. None

  
  
Posted 3 months ago
8K Views
69 Answers
4 months ago
3 months ago
Tags