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Answered
Hi

Hi @<1523701070390366208:profile|CostlyOstrich36> , Facing an issues in accessing the notebook preview. This is my own hosted clearml using helm charts
image
image

  
  
Posted 2 months ago
Votes Newest

Answers 25


@<1722061389024989184:profile|ResponsiveKoala38>

  
  
Posted one month ago

yes

  
  
Posted one month ago

plots are visible if I copy the url and open in new tab

  
  
Posted one month ago

@<1734020208089108480:profile|WickedHare16> Do you mean that you see the plots now? Are there still any _attempt_serialize_numpy errors in the apiserver logs?

  
  
Posted one month ago

Hi @<1734020208089108480:profile|WickedHare16> , what is the image of the apiserver that you are running?

  
  
Posted one month ago

It is tag: "1.16.1-499" , and setting cookieDomain in clearml values.yaml, fixed it

  
  
Posted one month ago

Please take a look here:
None
Does it match you scenario? Can you try the suggested workaround?

  
  
Posted one month ago

@<1722061389024989184:profile|ResponsiveKoala38>

  
  
Posted one month ago

thanks @<1722061389024989184:profile|ResponsiveKoala38>

  
  
Posted one month ago

not the plots, but the notebook preview

  
  
Posted one month ago

@<1734020208089108480:profile|WickedHare16> Can you please share an example plot url that is not opened in UI but you can see it in a separate tab?

  
  
Posted one month ago

I am not using external elastic search, that why not changed this value

  
  
Posted 2 months ago

hi @<1729671499981262848:profile|CooperativeKitten94> , how can I fix the above issues?

  
  
Posted 2 months ago

This is continuous error in apiserver

[2024-09-06 08:46:59,887] [9] [ERROR] [clearml.queue_metrics] Failed collecting queue metrics: `np.float_` was removed in the NumPy 2.0 release. Use `np.float64` instead.
Traceback (most recent call last):
File "/opt/clearml/apiserver/bll/queue/queue_metrics.py", line 311, in start
queue_metrics.log_queue_metrics_to_es(queue.company, [queue])
File "/opt/clearml/apiserver/bll/queue/queue_metrics.py", line 83, in log_queue_metrics_to_es
self.es.index(index=es_index, document=queue_doc)
File "/usr/local/lib/python3.9/site-packages/elasticsearch/_sync/client/utils.py", line 426, in wrapped
return api(*args, **kwargs)
File "/usr/local/lib/python3.9/site-packages/elasticsearch/_sync/client/__init__.py", line 2280, in index
return self.perform_request( # type: ignore[return-value]
File "/usr/local/lib/python3.9/site-packages/elasticsearch/_sync/client/_base.py", line 285, in perform_request
meta, resp_body = self.transport.perform_request(
File "/usr/local/lib/python3.9/site-packages/elastic_transport/_transport.py", line 319, in perform_request
request_body = self.serializers.dumps(
File "/usr/local/lib/python3.9/site-packages/elastic_transport/_serializer.py", line 224, in dumps
return self.get_serializer(mimetype).dumps(data)
File "/usr/local/lib/python3.9/site-packages/elastic_transport/_serializer.py", line 120, in dumps
return self.json_dumps(data)
File "/usr/local/lib/python3.9/site-packages/elastic_transport/_serializer.py", line 90, in json_dumps
return json.dumps(
File "/usr/local/lib/python3.9/json/__init__.py", line 234, in dumps
return cls(
File "/usr/local/lib/python3.9/json/encoder.py", line 199, in encode
chunks = self.iterencode(o, _one_shot=True)
File "/usr/local/lib/python3.9/json/encoder.py", line 257, in iterencode
return _iterencode(o, 0)
File "/usr/local/lib/python3.9/site-packages/elasticsearch/serializer.py", line 69, in default
serialized, value = _attempt_serialize_numpy_or_pandas(data)
File "/usr/local/lib/python3.9/site-packages/elasticsearch/serializer.py", line 125, in _attempt_serialize_numpy_or_pandas
serialized, value = _attempt_serialize_numpy(data)
File "/usr/local/lib/python3.9/site-packages/elasticsearch/serializer.py", line 160, in _attempt_serialize_numpy
np.float_,
File "/usr/local/lib/python3.9/site-packages/numpy/__init__.py", line 397, in __getattr__
raise AttributeError(
AttributeError: `np.float_` was removed in the NumPy 2.0 release. Use `np.float64` instead.
  
  
Posted 2 months ago

Hey @<1734020208089108480:profile|WickedHare16> - Not 100% sure this is the issue, but I noticed a wrong configuration in your values.
You configured both these:

elasticsearch:
  enabled: true


externalServices:
  # -- Existing ElasticSearch connectionstring if elasticsearch.enabled is false (example in values.yaml)
  elasticsearchConnectionString: "[{\"host\":\"es_hostname1\",\"port\":9200},{\"host\":\"es_hostname2\",\"port\":9200},{\"host\":\"es_hostname3\",\"port\":9200}]"

Please, if you want to use your own Elasticsearch, you will have to turn elasticsearch.enabled=false and just define externalServices.elasticsearchConnectionString . Setting both will fallback to the built-in elasticsearch and eventually cause issues.
Try changing this one and try again to see if it resolves 🙂

  
  
Posted 2 months ago

Mongo

  
  
Posted 2 months ago

Got it, and are you using external Mongo or Redis?

  
  
Posted 2 months ago

Thanks @<1729671499981262848:profile|CooperativeKitten94> it working now.

  
  
Posted 2 months ago

do we have any config for this

  
  
Posted 2 months ago

One more thing, I am uploading the plot, but it is not visible
image

  
  
Posted 2 months ago

clearml:
  cookieName: "clearml-token-k8s"
  cookieDomain: ""
  # -- Company name
  defaultCompany: "pixis"
  # -- Api Server basic auth key
  apiserverKey: GGS9F4M6XB2DXJ5AFT9F
  # -- Api Server basic auth secret
  apiserverSecret: 2oGujVFhPfaozhpuz2GzQfA5OyxmMsR3WVJpsCR5hrgHFs20PO
  # -- File Server basic auth key
  fileserverKey: XXCRJ123CEE2KSQ068WO
  # -- File Server basic auth secret
  fileserverSecret: YIy8EVAC7QCT4FtgitxAQGyW7xRHDZ4jpYlTE7HKiscpORl1hG
  # -- Readiness probe basic auth key
  readinessprobeKey: GK4PRTVT3706T25K6BA1
  # -- Readiness probe basic auth secret
  readinessprobeSecret: ymLh1ok5k5xNUQfS944Xdx9xjf0wueokqKM2dMZfHuH9ayItG2
  # -- Secure Auth secret
  secureAuthTokenSecret: ymLh1ok5k5xNUQfS944Xdx9xjf0wueokqKM2dMZfHuH9ayItG2
  # -- Test Server basic auth key
  testUserKey: "ENP39EQM4SLACGD5FXB7"
  # -- Test File Server basic auth secret
  testUserSecret: "lPcm0imbcBZ8mwgO7tpadutiS3gnJD05x9j7afwXPS35IKbpiQ"
  # -- Override the API Urls displayed when showing an example of the SDK's clearml.conf configuration
  clientConfigurationApiUrl: "
"
  # -- Override the Files Urls displayed when showing an example of the SDK's clearml.conf configuration
  clientConfigurationFilesUrl: "
"
  # -- Pass Clearml secrets using an existing secret
  # must contain the keys: apiserver_key, apiserver_secret, secure_auth_token_secret, test_user_key, test_user_secret
  existingSecret: ""

apiserver:
  enabled: true
  prepopulateEnabled: true
  serviceAccountName: clearml
  service:
    type: ClusterIP
  extraEnvs:
    - name: CLEARML_MONGODB_SERVICE_CONNECTION_STRING
      value: monogdburl
  ingress:
    enabled: true
    ingressClassName: alb
    hostName: clearml-api-dev.pixis.internal
    tlsSecretName: ""
    annotations:
      alb.ingress.kubernetes.io/backend-protocol: HTTP
      alb.ingress.kubernetes.io/certificate-arn: certificateurm
      alb.ingress.kubernetes.io/group.name: flyte
      alb.ingress.kubernetes.io/listen-ports: '[{"HTTP":80,"HTTPS": 443}]'
      alb.ingress.kubernetes.io/scheme: internal
      alb.ingress.kubernetes.io/ssl-passthrough: "true"
      alb.ingress.kubernetes.io/ssl-ports: https
      alb.ingress.kubernetes.io/target-type: ip
    path: "/"
  additionalConfigs:
    apiserver.conf: |
      auth {
        fixed_users {
          enabled: true
          pass_hashed: true
          users: [
            {
              username: "pai"
              password: "hassedpassword"
              name: "Pai team"
            },
            {
              username: "tcai"
              password: "hassedpassword"
              name: "TCai team"
            },
          ]
        }
      }  

fileserver:
  enabled: true
  serviceAccountName: clearml
  service:
    type: ClusterIP
  replicaCount: 1
  storage:
    enabled: true
  extraEnvs:
    - name: CLEARML_MONGODB_SERVICE_CONNECTION_STRING
      value: mongodburl
  ingress:
    enabled: true
    ingressClassName: alb
    hostName: clearml-files-dev.pixis.internal
    tlsSecretName: ""
    annotations:
      alb.ingress.kubernetes.io/backend-protocol: HTTP
      alb.ingress.kubernetes.io/certificate-arn: certificatearn
      alb.ingress.kubernetes.io/group.name: flyte
      alb.ingress.kubernetes.io/listen-ports: '[{"HTTP":80,"HTTPS": 443}]'
      alb.ingress.kubernetes.io/scheme: internal
      alb.ingress.kubernetes.io/ssl-passthrough: "true"
      alb.ingress.kubernetes.io/ssl-ports: https
      alb.ingress.kubernetes.io/target-type: ip
    path: "/"
  

webserver:
  enabled: true
  serviceAccountName: clearml
  service:
    type: ClusterIP
  extraEnvs:
    - name: CLEARML_MONGODB_SERVICE_CONNECTION_STRING
      value: mongodb url
  ingress:
    enabled: true
    ingressClassName: alb
    hostName: clearml-app-dev.pixis.internal
    tlsSecretName: ""
    annotations:
      alb.ingress.kubernetes.io/backend-protocol: HTTP
      alb.ingress.kubernetes.io/certificate-arn: certificate arn
      alb.ingress.kubernetes.io/group.name: flyte
      alb.ingress.kubernetes.io/listen-ports: '[{"HTTP":80,"HTTPS": 443}]'
      alb.ingress.kubernetes.io/scheme: internal
      alb.ingress.kubernetes.io/ssl-passthrough: "true"
      alb.ingress.kubernetes.io/ssl-ports: https
      alb.ingress.kubernetes.io/target-type: ip
    path: "/"
  

redis:
  enabled: true

mongodb:
  enabled: false

elasticsearch:
  enabled: true


externalServices:
  # -- Existing ElasticSearch connectionstring if elasticsearch.enabled is false (example in values.yaml)
  elasticsearchConnectionString: "[{\"host\":\"es_hostname1\",\"port\":9200},{\"host\":\"es_hostname2\",\"port\":9200},{\"host\":\"es_hostname3\",\"port\":9200}]"
  # -- Existing MongoDB connection string for BACKEND to use if mongodb.enabled is false (example in values.yaml)
  mongodbConnectionStringAuth: ""
  # -- Existing MongoDB connection string for AUTH to use if mongodb.enabled is false (example in values.yaml)
  mongodbConnectionStringBackend: ""
  
  
Posted 2 months ago

@<1734020208089108480:profile|WickedHare16> - please try configuring the cookieDomain

clearml:
  cookieDomain: ""

You should set it as your base domain, example pixis.internal , without any api or files in front of it

  
  
Posted 2 months ago

this is exactly same isssue

  
  
Posted one month ago

Hey @<1734020208089108480:profile|WickedHare16> , could you please share your override values file for the clearml helm chart?

  
  
Posted 2 months ago

🙂

  
  
Posted one month ago
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25 Answers
2 months ago
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