Hey, having very similar issue where my pipeline requires imports from other files in my repository that require the root of the directory to be on the pythonpath.
e.g.from src.pipelines.pipeline_function_dependencies import parse_total_dataset
src/pipelines/nested_cv_pipeline.py
So folder on level of src needs to be on pythonpath. Should I be using docker_args for this? Or maybe docker_bash_setup_script?
And how do I access the path to the working dir in the docker container so I can set the pythonpath?
@<1523701070390366208:profile|CostlyOstrich36> I've added clearml to my project. Everything works fine locally: all metrics and other metadata are sent to clearml. Now I want to run my experiments through agent and at this step I got problems.
My project has a complex structure, so I need to modify the PYTHONPATH
variable. Otherwise agent will fail with import error. Specifically, I want to add CLEARML_TASK_WORKING_DIR
there. How and where should I do this?
Hi @<1691983266761936896:profile|AstonishingOx62> , I'm not sure I understand what you're trying to do. You have some python code unrelated to ClearML. Does it run without issues? Did you afterwards add Task.init()
to that code?
Hi @<1714451218161471488:profile|ClumsyChimpanzee54> ! We will automatically add the cwd of the pipeline controller to the python path when running locally in a future version.
If running remotely, you can approach this in a few ways:
- add the whole project to a git repo and specify that repo in the pipeline steps
- have a prebuilt docker image that contains your project's code. you may then set the working directory to the path of your project
- if the agent running the docker is running on the same machine that contains your project, you may mount the directory containing your project using
-v
and extend the python path to point to that directory using the-e
docker argument. You may add these usingdocker_args
Thanks @<1523701435869433856:profile|SmugDolphin23> I will try the first one
You can export it in the same shell you run the agent in and that should work for example
export FOO=bar clearml-agent daemon ...