I assume the key and secret values here are redacted values and not the actual ones, right?
If i run helm get values clearml-agent -n clearml-prod
the output is the following:
USER-SUPPLIED VALUES:
agentk8sglue:
apiServerUrlReference: None
clearmlcheckCertificate: false
createQueueIfNotExists: true
fileServerUrlReference: None
image:
pullPolicy: Always
repository: allegroai/clearml-agent-k8s-base
tag: 1.25-1
queue: default
resources:
limits:
cpu: 500m
memory: 1Gi
requests:
cpu: 100m
memory: 256Mi
webServerUrlReference: None
clearml:
agentk8sglueKey: CLEARML8AGENT9KEY1234567890ABCD
agentk8sglueSecret: CLEARML-AGENT-SECRET-1234567890ABCDEFGHIJKLMNOPQRSTUVWXYZ123456
clearmlConfig: |-
api {
web_server: None
api_server: None
files_server: None
credentials {
"access_key" = "CLEARML8AGENT9KEY1234567890ABCD"
"secret_key" = "CLEARML-AGENT-SECRET-1234567890ABCDEFGHIJKLMNOPQRSTUVWXYZ123456"
}
}
sessions:
externalIP: 192.168.70.211
maxServices: 5
startingPort: 30100
svcType: NodePort
So if you now run helm get values clearml-agent -n <NAMESPACE>
where <NAMESPACE>
is the value you have in the $NS
variable, can you confirm this is the full and only output? Of course the $VARIABLES
will have their real value
agentk8sglue:
# Try newer image version to fix Python 3.6 regex issue
image:
repository: allegroai/clearml-agent-k8s-base
tag: "1.25-1"
pullPolicy: Always
apiServerUrlReference: "http://$NODE_IP:30008"
fileServerUrlReference: "http://$NODE_IP:30081"
webServerUrlReference: "http://$NODE_IP:30080"
clearmlcheckCertificate: false
queue: default
createQueueIfNotExists: true
# Keep resources minimal for testing
resources:
limits:
cpu: 500m
memory: 1Gi
requests:
cpu: 100m
memory: 256Mi
sessions:
svcType: NodePort
externalIP: $NODE_IP
startingPort: 30100
maxServices: 5
I have separed the most crutial part. Its a container that runs the standard helm commands
example:
....
cat > /tmp/server-values.yaml <<EOF
global:
defaultStorageClass: $STORAGE_CLASS
apiserver:
...
helm install clearml clearml/clearml
--namespace "$NS"
--values /tmp/server-values.yaml
--wait
--timeout "$TMO"
...
helm install clearml-agent clearml/clearml-agent
--namespace "$NS"
--values /tmp/simple-agent-values.yaml
--wait
--timeout 300s
these are the values :
clearml:
agentk8sglueKey: $ACCESS_KEY
agentk8sglueSecret: $SECRET_KEY
clearmlConfig: |-
api {
web_server: http://$NODE_IP:30080
api_server: http://$NODE_IP:30008
files_server: http://$NODE_IP:30081
credentials {
"access_key" = "$ACCESS_KEY"
"secret_key" = "$SECRET_KEY"
}
}
agentk8sglue:
# Try newer image version to fix Python 3.6 regex issue
image:
repository: allegroai/clearml-agent-k8s-base
tag: "1.25-1"
pullPolicy: Always
apiServerUrlReference: "http://$NODE_IP:30008"
fileServerUrlReference: "http://$NODE_IP:30081"
webServerUrlReference: "http://$NODE_IP:30080"
clearmlcheckCertificate: false
queue: default
createQueueIfNotExists: true
# Keep resources minimal for testing
resources:
limits:
cpu: 500m
memory: 1Gi
requests:
cpu: 100m
memory: 256Mi
sessions:
svcType: NodePort
externalIP: $NODE_IP
startingPort: 30100
maxServices: 5
It's a bit hard for me to provide support here with the additional layer of Argo.
I assume the server is working fine and you can open the clearml UI and log in, right? If yes, would it be possible to extract the Agent part only, out of Argo, and proceed installing it through standard helm?
As far as i can test, the server is going ok, i had some isses with resources not loading but solved those. The bigger issue for now is agent and prob could propagate to the serving. Later on i plan on adding also gpu resouces to both so im not entirely sure on that part
clearml-apiserver-866ccf75f7-zr5wx 1/1 Running 0 37m
clearml-apiserver-asyncdelete-8dfb574b8-8gbcv 1/1 Running 0 37m
clearml-elastic-master-0 1/1 Running 0 37m
clearml-fileserver-86b8ddf6f6-4xnqd 1/1 Running 0 37m
clearml-mongodb-5f995fbb5-xmdpb 1/1 Running 0 37m
clearml-redis-master-0 1/1 Running 0 37m
clearml-webserver-c487cfcb-vv5z5 1/1 Running 0 37m
Oh no worries, I understand 😄
Sure, if you could share the whole values and configs you're using to run both the server and agent that would be useful.
Also what about other Pods from the ClearML server, are there any other crash or similar error referring to a read-only filesystem? Are the server and agent installed on the same K8s node?
I had no issues deploying via the Github but helm is quite more confusing
I had those setted on the config file, but i can provide you what i am using for server and agent config if it helps. I got lost on the configs so i tried everything 🤣
In your last message, you are referring to pod security context and admission controllers enforcing some policies such as a read-only filesystem. Is that the case in your cluster?
Or was this some output of a GPT-like chat? If yes, please do not use LLMs to generate values for the helm installation as they're usually not providing a useful or real config
Hi! Im using just a plain Kubernetes cluster (kubeadm) running on Proxmox VM, and im using Argo to deploy the helm, in order to standarize it Let me know if you need any more details!
Hi @<1811208768843681792:profile|BraveGrasshopper38> , following up on your last message, are you running in an OpenShift k8s cluster?
I also see these logs:
bash
/root/entrypoint.sh: line 28: /root/clearml.conf: Read-only file system
This indicates that the container's filesystem is mounted as read-only , preventing the agent from writing its configuration file.
From
podSecurityContext:
readOnlyRootFilesystem: true # This causes the issue
PodSecurityPolicies
Security Context Constraints (OpenShift)
Admission controllers enforcing read-only filesystems
Python regex error in k8s glue agent :
sre_constants.error: bad inline flags: cannot turn on global flag at position 92
- Issue is in clearml-agent k8s glue codebase (Python 3.6 compatibility)
- Not configuration-related - persists across different HOCON formats
- Affects image tags:
1.24-21
,1.24-23
,latest
Hi, im trying to add the agent to a running server and facing the same issue.
Defaulted container "k8s-glue" out of: k8s-glue, init-k8s-glue (init)
p = sre_compile.compile(pattern, flags)
File "/usr/lib/python3.6/sre_compile.py", line 562, in compile
p = sre_parse.parse(p, flags)
File "/usr/lib/python3.6/sre_parse.py", line 855, in parse
p = _parse_sub(source, pattern, flags & SRE_FLAG_VERBOSE, 0)
File "/usr/lib/python3.6/sre_parse.py", line 416, in _parse_sub
not nested and not items))
File "/usr/lib/python3.6/sre_parse.py", line 765, in _parse
p = _parse_sub(source, state, sub_verbose, nested + 1)
File "/usr/lib/python3.6/sre_parse.py", line 416, in _parse_sub
not nested and not items))
File "/usr/lib/python3.6/sre_parse.py", line 765, in _parse
p = _parse_sub(source, state, sub_verbose, nested + 1)
File "/usr/lib/python3.6/sre_parse.py", line 416, in _parse_sub
not nested and not items))
File "/usr/lib/python3.6/sre_parse.py", line 734, in _parse
flags = _parse_flags(source, state, char)
File "/usr/lib/python3.6/sre_parse.py", line 803, in _parse_flags
raise source.error("bad inline flags: cannot turn on global flag", 1)
sre_constants.error: bad inline flags: cannot turn on global flag at position 92 (line 4, column 20)
Hi @<1857232027015712768:profile|PompousCrow47> , are you using pods with a read-only-filesystem limitation?